| An Exploration of Cartoon Art | December 1, 2001 | present |
| Bone Fragments: Short Stories by Jeff Smith | December 1, 2001 | February 10, 2002 |
| You Say Tomato, I Say Bizarro: A Retrospective of the Work of Dan Piraro | December 1, 2001 | February 10, 2002 |
| Gorey at Bay: Part I Gorey Style | December 1, 2001 | March 31, 2002 |
| Calvin and Hobbes Sunday Pages: 1985-1995 | February 16 | April 14, 2002 |
| Sparky Award Winners 2001-02 | February 16 | April 14, 2002 |
| Dreamtime/Wartime: The Comics of Aleksandar Zograf | February 16 | April 14, 2002 |
| Gorey at Bay: Part II Gorey Graphics | April 6 | July 28, 2002 |
| Web-slinging and Wall-crawling: The Art of Spider-Man | April 19 | July 21, 2002 |
| Arnold Roth: Free Lance | July 27 | September 29, 2002 |
| Zap, Crash, and Burn: Underground Comix and the Bay Area | July 27 | September 29, 2002 |
| Gorey at Bay: Part III Gorey Stories | August 3 | November 17, 2002 |
| Superwacky: Animation on Television | October 5, 2002 | January 12, 2003 |
| Gorey at Bay: Part IV Gorey Details | Nov 23, 2002 | March 30, 2003 |
| Small Press Spotlight featuring Jason Shiga | February 1 | April 19 2003 |
| Hate Mail: Comic Strip Controversies | January 25 | June 8, 2003 |
| She Draws Comics: Great Women Cartoonists | January 25 | June 29, 2003 |
| Small Press Spotlight featuring Lark Pien | April 25 | August 3, 2003 |
| Keeping the Faith: The Life and Art of Morrie Turner | April 5 | July 27, 2003 |
| Alternative to What? Comic Art of the Free Weeklies | June 14 | October 12, 2003 |
| Small Press Spotlight featuring Ben Catmull | August 9 | December 14, 2003 |
| Great Comic Cats | July 5 | November 9, 2003 |
| From Off the Streets of Cleveland Comes American Splendor | August 5 | November 30, 2003 |
| Too Hot to Handle: Creating Controversy Through Political Cartoons | October 18, 2003 | February 1, 2004 |
| Don’t Parade on My Reign: A Cartoon Salute to Willie Brown | December 6, 2003 | February 1, 2004 |
| Small Press Spotlight featuring Derek Kirk Kim | December 20, 2003 | March 20, 2004 |
| The Art of Dr. Seuss: A Retrospective and National Touring Exhibition | March 5 | April 10, 2004 |
| Lights, Camera, ACTION!!!: From the Printed Page to the Silver Screen | November 15, 2003 | May 16, 2004 |
| Happy Hundredth, Dr. Seuss! The Timeless Art of Theodor Geisel | February 20 | June 20, 2004 |
| Small Press Spotlight featuring Justin Hall | March 26 | June 20, 2004 |
| Small Press Spotlight featuring Fly | June 26 | September 19, 2004 |
| The Sting of the Wasp: San Francisco’s Political Cartoon Weekly 1876-1897 | May 22 | November 14, 2004 |
| Raggedy Ann and Friends: The Art of Johnny Gruelle | June 26 | November 14, 2004 |
| Small Press Spotlight featuring Fredo | September 25, 2004 | January 16, 2005 |
| Small Press Spotlight featuring Garret Izumi | January 22 | April 16, 2005 |
| Contemporary Literary Comics: Selections from McSweeney’s #13 | November 20, 2004 | May 22, 2005 |
| Small Press Spotlight featuring Graham Annable | April 22 | August 7, 2005 |
| Garfield: Meow and Then | May 28 | September 25, 2005 |
| Celebrate Thirty Years of Phil Frank’s Farley | June 10 | September 25, 2005 |
| Play Ball! Historic Baseball Cartoons from 1945-1965 | May 28 | October 30, 2005 |
| Small Press Spotlight featuring Jon “Bean” Hastings | August 13 | November 27, 2005 |
| Gross, Gruesome and Gothic | October 1, 2005 | April 30, 2006 |
| Small Press Spotlight featuring John Porcellino | December 5, 2005 | February 5, 2006 |
| Why Do They Hate US? An International Perspective on American Politics | November 5, 2005 | April 30, 2006 |
| Small Press Spotlight featuring Gene Yang | February 11 | June 11, 2006 |
| No Straight Lines: Queer Culture and the Comics | April 1 | June 25, 2006 |
| Earthquake!!! | April 15 | June 25, 2006 |
| Cartoon Tunes: Capturing Music in Comics | May 6 | October 15, 2006 |
| Small Press Spotlight on Andrice Arp | May 23 | September 17, 2006 |
| Draw Me A Story: A Century of Children’s Book Illustration | July 1, 2006 | February 18, 2007 |
| Cartooning with Students/826 Valencia | July 1 | October 29, 2006 |
| Small Press Spotlight on Renee French | September 23, 2006 | February 11, 2007 |
| Rejection Collection: Not in the New Yorker Cartoons | October 12, 2006 | April 15, 2007 |
| Peanuts Holiday Parade: A Celebration of the Art of Charles M. Schulz | November 24, 2006 | September 2007 |
| Small Press Spotlight on Debbie Huey | February 17 | May 13. 2007 |
| Worlds of Wonder | February 24 | June 17, 2007 |
| Why Do They Still Hate US? | April 21 | October 21, 2007 |
| Small Press Spotlight on Vanessa Davis | May 19 | September 16, 2007 |
| Edward Gorey’s Dracula | August 11, 2007 | February 3, 2008 |
| Small Press Spotlight on Hellen Jo | September 22, 2007 | January 20, 2008 |
| I Am Ten: Bay Area Spotlight on Lark Pien | September 22, 2007 | January 27, 2008 |
| The Art and Flair of Mary Blair | October 27, 2007 | April 6, 2008 |
| Small Press Spotlight on Joey Sayers | January 26 | May 4, 2008 |
| Bay Area Spotlight on Creig Flessel | February 2 | June 8, 2008 |
| Sex and Sensibility | February 9 | June 8, 2008 |
| Farley’s San Francisco Chronicles: A Salute to Phil Frank | April 6 | September 14, 2008 |
| Small Press Spotlight on Andy Hartzell | May 10 | August 10, 2008 |
| The Knight Life: Bay Area Spotlight on Keith Knight | June 14 | November 9, 2008 |
| From Richie Rich to Wendy the Witch: The Art of Harvey Comics | June 28 | November 30, 2008 |
| Small Press Spotlight on Briana Miller | August 16 | November 30, 2008 |
| The Totoro Forest Project | September 20, 2008 | February 8, 2009 |
| Colan: Visions of a Man without Fear | November 15, 2008 | March 15, 2009 |
| Small Press Spotlight on Ryan Claytor | December 13, 2008 | March 8, 2009 |
| The Art of Coraline | January 24 | February 15, 2009 |
| Watchmen | February 21 | August 2, 2009 |
| The Art of Stan Sakai: Celebrating 25 Years of Usagi Yojimbo | February 27 | July 12, 2009 |
| Small Press Spotlight on Rina Ayuyang | March 14 | June 14, 2009 |
| The Brinkley Girls | March 21 | September 6, 2009 |
| Small Press Spotlight on MariNaomi | June 20 | September 13, 2009 |
| Once Upon A Dream: The Art of Sleeping Beauty | July 12, 2009 | January 10, 2010 |
| Monsters of Webcomics | August 8 | December 6, 2009 |
| The Art of Spain Rodriguez | September 12, 2009 | February 7, 2010 |
| Small Press Spotlight on Richard Sala | September 19 | December 13, 2009 |
Posted: December 1st, 2001 under Past Exhibitions.